Deanne Taylor issues

Results 6 issues of


                                            Deanne Taylor

Single-cell package in Python to add to the list?

https://github.com/TaylorResearchLab/scedar https://pypi.org/project/scedar/ https://journals.plos.org/ploscompbiol/article/comments?id=10.1371/journal.pcbi.1007794

Package scedar is missing.

https://pypi.org/project/scedar/ Published in PLoS Comp Bio earlier this year. https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007794

Wrong parameterization causing error

Hi, all. I'm on a Redhat machine, using podman profile. Trying out the atacseq pipeline. (editing my original) I saw the error when I ran this again: (start paste) >...

Error converting Tabula Sapiens h5ad files to h5seurat

Anyone else have these issues trying to convert using SeuratDisk? My main error is "Error in if (!x[[i]]$dims) { : argument is of length zero" (see below) Convert seemed to...

Misspelling of enzyme name: aceyltransferase

# Description of the issue Misspelled Carnitine O aceyltransferase mitochondrial should be Carnitine O acetyltransferase mitochondrial ? https://en.wikipedia.org/wiki/Carnitine_O-acetyltransferase -- # Page http://bigg.ucsd.edu/universal/reactions/CSNATm # Browser Mozilla/5.0 (Macintosh; Intel Mac OS X...

error on redhat with lssh2

Redhat has deprecated lssh2 in version 8. Any workaround to install gert with that limitation? Operating System: Red Hat Enterprise Linux 8.6 (Ootpa) CPE OS Name: cpe:/o:redhat:enterprise_linux:8::baseos Kernel: Linux 4.18.0-372.26.1.el8_6.x86_64...