Wei Tang
Wei Tang
> Did you have the opportunity to try @tangwei? I tried to install from the branch following your video instruction. I came to the point of checkout, but after I...
Ah okay, now it installed correctly and I saw dipy_convert_tensors. I don't have tensor files from other software for testing though. @skoudoro do you know if there are test data...
The installation worked and I can pull up -help no problem. But I don't have data to test it. I basically don't have tensor files from other software.
Got ya. Will do!
> in this case, the easy way is: > > * get dipy tensor > * convert to fsl tensor > * open with fsleyes the new tensor (it should...
From what I see in HCP 7T data, it's random among all three, not only between CSF & GM. Here's an example from two HCP subjects. Subject 100610: 0: 1:...
This would not be a problem with analyses using just a few subjects because one can manually identify the tissue maps. It becomes a real problem with batch processing. For...
Yeah, I have a temporary solution using the aparc+aseg files provided by HCP to match the tissue masks. But general users would benefit more from something independent of additional check...
I see, now that makes sense. It's a tissue separation issue, not order issue. Nonetheless the issue seems prominent. I checked the 176 HCP 7T subjects, only about 80 had...
Sure, I'm using the HCP 7T data on UITS' storage /N/project/hcp_dcwan. Here are some problematic subjects: 1. GM + CSF mixing: 100610, 406836, 901442 2. WM + CSF mixing: 436845,...