Talon Chandler

...and `xy_pixel_size` is absent in our 1.3.0 zenodo datasets (and oftentimes from the microscopes if the pixel size isn't calibrated). For example: ``` $ iohub info 2022_08_04_recOrder_pytest_20x_04NA/2T_3P_16Z_128Y_256X_Kazansky_1/ Reading file: /Users/talon.chandler/Desktop/0.4.0-release/misc/recOrder_test_data/2022_08_04_recOrder_pytest_20x_04NA/2T_3P_16Z_128Y_256X_Kazansky_1...

Can `convert` pass the most important information from micromanager image plane metadata?

8

**Background:** Earlier version of the tiff-to-zarr `convert` command would write all of the micromanager image plane metadata to text files. Micromanager writes metadata for each plane, so the resulting files...

This PR adds support for - passing falcon's XY stage positions to om.zarr metadata (the existing pattern matching failed) - micromanager's [new Tile Creator prefix name format](https://github.com/micro-manager/micro-manager/pull/1897) Tested on: Input:...

Support loading data from a specific resolution of a .zarr pyramid

2

@dsundarraman and I are planning to bring multiscale pyramids to the course so that we can iterate quickly on downsampled versions of our data. @mattersoflight and I think it would...

Moving to a separate issue from [this discussion](https://github.com/czbiohub-sf/iohub/pull/234#pullrequestreview-2194342491), so that it is not lost.