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The problem of data export

Open 1zxz1300 opened this issue 7 months ago • 7 comments

I marked two crabs in the video using SLEAP, trained the model, and exported the coordinate data (in either CSV or HF format). However, the exported coordinate data only includes the coordinates of one crab. Could you please help identify where the issue might lie? What steps should I take to obtain the coordinate data for both crabs?

1zxz1300 avatar May 27 '25 12:05 1zxz1300

Hello @1zxz1300,

Are both of your crabs tracked?

Thanks,

Elizabeth

eberrigan avatar May 28 '25 03:05 eberrigan

Yes, both crabs have been tracked.

| | zhangxuanzhao | | @.*** | ---- Replied Message ---- | From | @.> | | Date | 5/28/2025 11:14 | | To | @.> | | Cc | @.>, @.> | | Subject | Re: [talmolab/sleap] The problem of data export (Issue #2190) | eberrigan left a comment (talmolab/sleap#2190)

Hello @1zxz1300,

Are both of your crabs tracked?

Thanks,

Elizabeth

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1zxz1300 avatar May 28 '25 04:05 1zxz1300

Hello,

I am facing the same problem, which I also tracked 2 mice, but I only see the coordinates of one instance in CSV and HF format. how can I fix it?

ponpiki avatar Jun 03 '25 15:06 ponpiki

Hello,  你好

I am facing the same problem, which I also tracked 2 mice, but I only see the coordinates of one instance in CSV and HF format. how can I fix it?我遇到了同样的问题,我还跟踪了 2 只老鼠,但我只能看到 CSV 和 HF 格式的一个实例的坐标。我该如何解决?

Sorry, I haven't solved this problem yet. Have you made any progress?

1zxz1300 avatar Jun 10 '25 13:06 1zxz1300

Hello,

Sorry for my late reply. Could you all attach some screenshots to better understand what is happening?

You can attach a screenshot per step you are taking in the GUI and show the tracked identities in the GUI to confirm the track identities.

Thanks so much,

Elizabeth

eberrigan avatar Jun 23 '25 04:06 eberrigan

Dear Elizabeth, Please accept my apologies for the delayed response.

As requested, I have compiled the detailed SLEAP operation procedures along with supporting screenshots and exported coordinate data. These materials are attached to this email for your review.

I am looking forward to our discussion. 

Animal coordinate data.csv

Detailed process of operating.pdf

1zxz1300 avatar Jul 08 '25 02:07 1zxz1300

I have the same issue. No animal_id available in the exported CSV. Even though the prediction labels are present for both animals.

pv-is-nrt avatar Aug 06 '25 18:08 pv-is-nrt