Manuel Torrinha

Adds figure numbers to better_figures_and_images

1

PR #114 has minor differences that make patching from that commit impossible. This commit fixed those differences. Reordered required pip packages to an alphabetical order and added one missing package,...

Python3 syntax errors

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Usage of print as a macro, i.e https://github.com/assemblerflow/flowcraft/blob/master/flowcraft/bin/renamePE_samtoolsFASTQ.py#L98: ``` print 'Runtime :' + str(hours) + 'h:' + str(minutes) + 'm:' + str(round(seconds, 2)) + 's' ``` is not allowed, all...

Cannot compile shifter from source in some debian-based systems

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This happens with the following branches: - master - 18.03 - 16.08 With the following systems: - Debian 8 - Debian 9 - Ubuntu 18.04 When running make in the...

AttributeError: 'float' object has no attribute 'iteritems'

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This is more of a notice than an issue by itself. After performing manual installation of Shifter with GPU support, the celery worker gives an error: `AttributeError: 'float' object has...

Parallel policy dependencies fail with frozen cookbook error

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# Description When creating (at least) two policy files that include a common policy file, the push to the chef server fails with: ``` Uploading policy policy1-v1-2019-03-18-controller (1b1bb7c956) to policy...