Thomas Sewell

Results 5 comments of Thomas Sewell

> if someone is facing this issue now, then try replacing /usr/local/lib/python3.6/site-packages/grabseqslib/sra.py **line 45** with metadata = requests.get("[https://trace.ncbi.nlm.nih.gov/Traces/sra-db-be/sra-db-be.cgi?rettype=runinfo&term="+pacc](https://trace.ncbi.nlm.nih.gov/Traces/sra-db-be/sra-db-be.cgi?rettype=runinfo&term=%22+pacc)) Worked for me thank you

Hey thanks for the reply - its currently version 2.8. Yeah we thought that as well. Is it recommended to running using the "Hard" guidelines?

OK thank you - well i actually didn't mean the installation just running the individual commands (as in RUNNING BRACKEN: HARD VERSION tutorial). I thought perhaps there were some parameters...

![Screenshot_20241112-120757.png](https://github.com/user-attachments/assets/8563c084-2bbd-4511-bee2-0b82c7a70b26)

![Screenshot_20241112-120855.png](https://github.com/user-attachments/assets/fb2e4053-903f-4361-9a48-1bcfc5f7951f)