suzialeksander
suzialeksander
From helpdesk, Licong Cui from The University of Texas Health Science Center at Houston: > This is Licong Cui from The University of Texas Health Science Center at Houston. One...
### Discussed in https://github.com/geneontology/helpdesk/discussions/399 Originally posted by **suzialeksander** June 15, 2022 From Helpdesk email: > Dear curators, > > Thank you for providing this excellent resource which I have been...
From the inferred annotations in the SGD load, the following terms need the DO_NOT_ANNOTATE tag same as https://github.com/geneontology/go-ontology/issues/27054#issuecomment-1964704962 - [ ] GO:0042918 alkanesulfonate transport' - [ ] GO:0042959 alkanesulfonate transmembrane...
I keep coming across https://sourceforge.net/projects/geneontology/, and not sure if the header is accurate (could be bots) but it always has 0< "downloads this week". Seems like SVN allows *something* to...
This was emailed through helpdesk, but there appear to be at least a few different things to be addressed so this ticket can be moved/duplicated as appropriate. > Hello, >...
We had a user write in with a series of ontology questions that do not appear to be addressed in our help docs. They include: - [ ] My questions...
Reported by a user: http://current.geneontology.org/products/pages/downloads.html annotation counts are apparently showing counts calculated BEFORE IBAs are appended, so the counts are incorrect. Example: > Homo sapiens > EBI Gene Ontology Annotation...
We have a user that is trying to cross-reference >1000 Reactome terms to GO, and cannot find some of these in the reactome2go: http://current.geneontology.org/ontology/external2go/reactome2go. The list includes - degradation of...
- do the generic_urls (http://flybase.org -> https://www.alliancegenome.org/members/flybase ?) also need to be changed? 796 1559 2320 2331 2331 2755 2862 2904 - 1566 1572 are the MGI:MGI and may not...
Spawned off of #847: Need to review the Annotation Downloads (bottom of geneontology.github.io/_docs/download-go-annotations.md, which links to http://current.geneontology.org/products/pages/downloads.html) and remove unneeded entries