Oliver Stolpe

Results 22 issues of Oliver Stolpe

Hello, when I run NextClip on my mate-pair data (100bp), all the reads in category D get trimmed by at least 19 bases or more, down to read lengths of...

The read count of a bamhash computation of paired fastq files is not the same as the read count of a bamhash computation of the bam file the paired fastq...

**Is your feature request related to a problem? Please describe.** The `geneinfo` app isn't used much anymore, expect for resolving gene panels. This can be done with a call to...

enhancement

**Is your feature request related to a problem? Please describe.** I started to remove (or replace by mehari) references to the HGNC table as requested in #1551. However, two references...

enhancement

**Is your feature request related to a problem? Please describe.** The HGMD Pro link-out can be enabled in the configuration and configured with a custom URL, but this is never...

enhancement

**Describe the bug** The precomputed scores and SpliceAI score that are shown in the result list are not shown in the variant details, only "prediction not available".

bug

**Describe the bug** When I removed hgmd and dbnsp filter settings as requested in #739 I noticed that the settings are stuck to previous query settings and the only solution...

bug

The selection for quick presets in the case details show all presets among all projects available. This should be limited to only those available to the current project.

bug

When a query can't be created, the error response from the server is not descriptive (i.e. just a 500er). Also the logs don't tell anything. This needs to be improved....

enhancement

**Is your feature request related to a problem? Please describe.** Show the case name in the variant details, maybe also the project. Currently this is not the case.

enhancement
UI/UX