Michal Stolarczyk

Results 44 comments of Michal Stolarczyk

> But would it not be possible for the reduce process to actually check for completion of the mapped processes? It would be possible, I just wasn't sure if that's...

> It would certainly be VERY helpful for us. running reduce while assets are built should be possible now on dev.

> I can confirm that this works fine now. If we could get that release when you're ready so the new Conda package etc become available that'd help with our...

hi @lmfaber, thanks for reaching out. Sure, we're willing to expand refgenie asset types. Can you put together a recipe that builds the asset that you need? You can open...

hmm I don't recall implementing anything like this. Can you peek into those files? What's inside? What asset did you build when this happened?

I ran fasta asset build for a large genome (hg38) couple of times while watching the config dir with `watch -n 0.1 'ls'` and didn't notice any files being created...

just tried to build this genome under a different name and still no luck

I didn't look specifically for this, but definitely looked into the config directory along the way and didn't notice any temporary files

There is no refgenie command to retrieve the inputs. Broadly speaking, we need to retain the _effective_ `build` inputs (defaults or values passed to `--files`, `--assets`, `--params` options in `refgenie...

**For asset classes** Is the asset class description really an attribute of a class? It would be nice (and neccessary, in fact) that child classes change the description based on...