Stephen Williams
Stephen Williams
~/.R/Makevars with ``` CFLAGS=-std=gnu11 ``` worked for me!
@Zethson just wanted to see if there were any issues with merging this PR.
@giovp looking at this again, it seems you drop the mixed up columns anyway (https://github.com/scverse/squidpy/blob/fb069ded7515e8a1386224d32344a8657cbecd2e/squidpy/read/_read.py#L100) so I'd suggest having one code path with the correct column names. Please let me...
> > @giovp looking at this again, it seems you drop the mixed up columns anyway ([scverse/squidpy@`fb069de`/squidpy/read/_read.py#L100](https://github.com/scverse/squidpy/blob/fb069ded7515e8a1386224d32344a8657cbecd2e/squidpy/read/_read.py#L100)) so I'd suggest having one code path with the correct column names. Please...
@giovp do we have an update on merging this yet? Anything left on my end?
@asmlgkj Just wanted to let you know that we're on top of this. I'm hoping to have a PR up on `spatialdata-io` in the next day or so.
> Hi [@stephenwilliams22](https://github.com/stephenwilliams22) - wanted to check in and see if there are any updates to this, I just got some Visium HD 3' data back and am curious if...
> [@timtreis](https://github.com/timtreis) [@stephenwilliams22](https://github.com/stephenwilliams22) thanks a lot. I sovle it by a leson from 10x genomics. also used your packages ([spatialdata-io](https://github.com/scverse/spatialdata-io)) read and save data. > > I have a couple...
> Hi [@stephenwilliams22](https://github.com/stephenwilliams22) - wanted to check in and see if there are any updates to this, I just got some Visium HD 3' data back and am curious if...
> Hi again [@stephenwilliams22](https://github.com/stephenwilliams22) - I've had a chance to test this out and it is working great for the most part. The only issues I am encountering are related...