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plan forward

Open stemangiola opened this issue 2 years ago • 0 comments

  • [x] create a usage statistics with NECTAR
  • [x] create a function that passes the full dataset metadata as list of tibbles
  • [ ] build an automated DB upload and update system, when a new version of the DB is created
  • [ ] publish Python API
  • [ ] ask for more disk space, to allow 3 DB versions
  • [ ] convert CELLxGENE processing pipeline to a more standard framework, to update our database in the future
  • [ ] use Anndata for R and Python APIs
  • [ ] Better automate cell type curation
  • [ ] make the DB portable for institute to setup local cache like WEHI has
  • [ ] make pseudobulk available

stemangiola avatar Feb 21 '23 23:02 stemangiola