CuratedAtlasQueryR
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plan forward
- [x] create a usage statistics with NECTAR
- [x] create a function that passes the full dataset metadata as list of tibbles
- [ ] build an automated DB upload and update system, when a new version of the DB is created
- [ ] publish Python API
- [ ] ask for more disk space, to allow 3 DB versions
- [ ] convert CELLxGENE processing pipeline to a more standard framework, to update our database in the future
- [ ] use Anndata for R and Python APIs
- [ ] Better automate cell type curation
- [ ] make the DB portable for institute to setup local cache like WEHI has
- [ ] make pseudobulk available