Suoqin Jin

@victorwang123 @kim881030 In this heatmap, it is simply the sum of the original computed interaction strength in each column and row. When checking the color bar, it ranges from 0...

@HaTonemann Since CellChat is based on the average gene expression per cell group, the results are not sensitive to the number of cells. BUT i think the minimum number of...

@science070308 @HiRuser2021 Have you guys figured it out? I feel it is due to the improper input of your data. It is better to show me your input data.

@victorwang123 You can define the point size based on one parameter of this function. But the default one is the same size.

@raphaela2018 For individual L-R pair, you need to use `netVisual_individual`

@yxzhangLAB iF IT SHOWS `Cannot find SEMA7 . Please input a correct name!`, it means that this signaling is not identified by cellchat.

@Wangyananblink You may can consider to adjust the method for calculating the average gene expression per cell group when running `computeCommunProb`. e.g, USER can set `type = "truncatedMean"` and `trim...

@sofiapuvogelvittini It looks like gene expression levels in this pathway is very low from your violin plot. Can you quantitatively check the expression of these ligands and receptors using a...

@coarfa cellchat_mouse_heart.control@net$weight should be a matrix. Can you check if this matrix has row names and column names? If not, you should set both.

@RongDing-NMU Yes, you can redo it.