Suoqin Jin

icon indicating a website link https://jinworks.github.io/

icon company Wuhan University icon location Wuhan, China icon location Professor in the School of Mathematics and Statistics at Wuhan University <#Single Cell Genomics #Computational Biology #Systems Biology #Data Mining

Results 258 comments of Suoqin Jin

Is there a code to adjust the dot size when using`netVisual_bubble` function?

@MinDeng-LA I have now added the size parameters in this function. Please check it in the version v2.1.1.

Is there a code to adjust the dot size when using`netVisual_bubble` function?

@MinDeng-LA The new version is available now.

Is there a code to adjust the dot size when using`netVisual_bubble` function?

@MinDeng-LA You should provide a value such as `dot.size.max = 1`

Data unreachable

@MingLi-929 I just asked others to try the link and it works.

Select highly variable loci for ATAC-seq

@PeterZZQ Please check the function `findNearbyLoci`.

lmHeatmap: node stack overflow

Hi @f6v , I am sorry that I have not encounter such issue before. I have not upgraded my R version to 4.0. There might be some conflicts with R...

lmHeatmap: node stack overflow

Thanks @jokergoo !! I just added a tiny noise to the matrix @f6v

Can't run identifyClusters

Hi @f6v , The step `addpData` is optional. For simulated data, we just use the ground-truth labels to validate our results. For real dataset, you can simply skip it. For...