Thomas Holder

Since this is exactly how we name our survey stations, I was very pleased to find out that Survex now accepts example 1. I know that it used to give...

I get the same error with this PDF file: https://www.ema.europa.eu/documents/product-information/rapamune-epar-product-information_en.pdf

You are right, geometry update is triggered by rendering. What do you mean by executing commands one by one? What's your use case?

Before `cmd.get_wizard().apply()`, add this: ```py cmd.get_wizard().do_select("res") ```

You could also use [psico.modelling.mutate_all](https://github.com/speleo3/pymol-psico/blob/007fd7efaf6a73ae28a7e3b155fd07dc3d3849da/psico/modelling.py#L164). ```py psico.modelling.mutate_all(f"{base_name} and resn ASN+GLN", "LEU") ```

Good find. Would be great to find a solution for this.

> Is there an easier method? If you have installed PyMOL into a virtual environment, then this should also work: ```sh cd testing python -m pytest tests/api/test_commanding.py ```

In principle, I like your idea and I think it would be cool if you work on that. One thing: In my opinion, the type annotations must remain compatible with...

I experimented with PySide6 and also ran into the `setSuffix` issue. This commit works around the issue: https://github.com/speleo3/pymol-open-source/commit/5eb6de645aced9d0419b6eb9c686d55fc4dbf869

Have you tried `PREFIX_PATH=$HOME/.local`?