Melissa Marr

icon company University of Edinburgh icon location roslin icon location Genomics of endangered species and rare breed livestock

Results 3 issues of Melissa Marr

plot.dist.py output to screen only

4 comment

I've calculated mosdepth coverage with the command: mosdepth -n -b 500 -x -t 4 -Q30 $OUTPUT_DIR/${base%.cov} ${this_bam} I run plot-dist.py with: python mosdepth-0.3.3/scripts/plot-dist.py *.global.dist.txt However, the output prints to screen...

Output bin file?

Hello, thanks for this software - it's very useful! Is there a means to output a textfile of the bins? I'd like to use it for some other applications, if...

Error: disimilarity matrix is not a full rank matrix

3 comment

Dear Desislava, I realise this error has been raised before (#12) but I have followed all suggestions and cannot find a solution to this error with my data. My final...