Shimin Shuai

Hi Slavatron, Thank you for your interest. It's on my list. The bottleneck is to collect all genomic features and test them in hg38. ENCODE does have hg38 tracks so...

Hi @cboursnell, that's something I can do pretty quickly. I will do it as an intermediate solution. Thanks for the suggestion! Hi @alhafidzhamdan, I will provide a genome lift version...

Thank you both so much for pointing these out! I guess a lot of packages have been updated over the past two years. I will look into them asap.

Sorry for the delay. I have found a solution to the incompatibility issue. The issue is caused by a mixture use of `pip` and `conda`, thus I have moved the...

Hi @Amanda2018genetics, I just realized the [pytables](https://www.pytables.org/usersguide/installation.html) package has different names in `conda` (pytables) and `pip` (tables). I will check if this fixes the problem and let you know asap!...

Hi @Amanda2018genetics, Here is a way to install `driverpower` without `conda`: ``` git clone https://github.com/smshuai/DriverPower.git cd driverpower pip install . ``` Cheers, Shimin

Hi @alhafidzhamdan, I'm wondering if you are talking about the modelling step as it's the most time-consuming step? The `GBM` by default uses 15 cores if my memory is correct...