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Create BIOM-format tables (http://biom-format.org) from Kraken output (http://ccb.jhu.edu/software/kraken/, https://github.com/DerrickWood/kraken).

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Hello! We use your software regularly and it has allowed us to integrate Kraken results seamlessly with our downstream analysis scripts. It would be a great help if you could...

Hi, Thanks a lot for your useful script. I would like to use kraken-biom in order to process [krakenhll ](https://github.com/fbreitwieser/krakenhll) output (krakenhll adds some additional functionality to kraken to decrease...