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Launch Cellguide in Browser
Hi, I am trying to use cellguide to visualize seurat objects. I am able to launch cellguide in the browser but, as you can see at the bottom of the page, nothing gets displayed on my end. I'm not sure if this is user-error on my end or a bug so I am reaching out. Â
Steps to reproduce
# file: environment.yml
name: cellbrowser
channels:
- bioconda
dependencies:
- ucsc-cell-browser=1.2.6
mamba env create -f environment.yml
mamba activate cellbrowser
https://github.com/slowkow/cellguide?tab=readme-ov-file#step-3-copy-cell-guide-files
curl -s https://codeload.github.com/slowkow/cellguide/tar.gz/master | tar xvz
https://cellbrowser.readthedocs.io/en/master/quick_start.html
curl -k https://cells.ucsc.edu/downloads/samples/mini.tgz | tar xvz
cd mini
cbBuild -o html
command cp -rf ../cellguide-master/www/* html/
cbBuild -o html -p 8888