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7
issues of
Jadwiga Słowik
Add window slide size param in order to count k-mers using a fixed, configurable window slide step. Currently, after each step, the window moves by one position.
enhancement
`Bloom filter` would be an extra layer between `KMerManager` and a custom dictionary.
enhancement
nice to have
performance
Perhaps, an additional helper buffer for k-mer formatting would improve performance and prevent from the heap lock in multithreaded k-mer string generation. https://www.drdobbs.com/tools/memory-constraints-on-thread-performance/231300494
performance
In order to prevent exposing methods that are not necessary for a user and currently they are exposed just because of testing. Check out: https://github.com/mi2-warsaw/FSelectorRcpp
refactor