Santiago Lacalle issues

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                                            Santiago Lacalle

Build fail with GCC and OpenMPI (FAST_BYTESWAP)

Build is failing compiling against: - GCC 11.3.0 - Openmpi 4.1.4 - netCDF 4.9.0 - using "linux_amd64_gfortran" build_options file. ``` make[1]:` Entering directory '/home/user/L2_MITgcm/experiments/v8/build' mpif77 -fconvert=big-endian -fimplicit-none -fallow-argument-mismatch -mcmodel=medium -O3...

samtools check updated to work in Batch mode

"samtools view" will fail in non interactive shells.