Siyao Liu

I did install htslib in the silbling folder first.

Yes. It does exist. Can you please help me fix the error? I really want to try running Demuxlet on my data, but not being able to install the software...

@RegnerM2015 Hi Matt, didn't running DiagMultiKPlot() print the optimal k values?

@RegnerM2015 Ok. I will take a look and have MultiK spit out optimal k values automatically and store it as a variable. However, I would still recommend manually checking the...

@RegnerM2015 Hi Matt, glad that you figured out. Sorry I haven't got time to get to this. I will try to work on it soon and make sure the optimal...

@Lakshya3141 Hi! I think you will need to run the analysis on a large computing node with more than 10 reps. You will probably need to request more memories for...

@kysbbubbu Hi Sorry about my late response. Yes, the current MultiK version is done on single core CPU and we are working on setting it up on multi-CPU core. It...

@chrarnold Hi! Sorry I have never seen such error before. Did you get the message immediately after you ran Multik()?

@chrarnold hmm..., did you use normalized counts in your seurat object?

@chrarnold Glad you figured out the issue that was causing the error. MultiK was developed specifically for scRNAseq data which typically contains more than 70-80% of 0s. I don't think...