Discriminative variants with GTbarcode

[flde]

Dear all,

Many thanks for the great tool and help on GitHub. I run Vireo and the results looks very promising (single cell RNAseq | mode 1a with genome 1k).

I am now wondering which variants actually support the discrimination between donor0 and donor1. I run GTbarcode but only get one result which seems not enough. However, I can't find any help/documentation about the GTbarcode function or the vireo vcf output file - which would be helful too.

Do you have recommendations about that? Or would it be possible to parse the vireo vcf with other tools to rank variants?

Many thanks for your help! Florian