Question: Bulk RNA-seq from nanopore?

[alexandruioanvoda]

Hi! Impressive work!

I was wondering whether your package would support demultiplexing bulk RNA-seq? And nanopore-based (i.e. not Illumina short) reads? Is support for other genomes (e.g. other mammalians) easily configurable?

[huangyh09]

Thanks. We do have an extension on demultiplexing bulk RNA-seq for multiple donors and will have a preprint in a few weeks along with tutorials. At the moment, we can share a pre-released version with you if you send us an email ([email protected]).

For nanopore-based data, I'm not sure. I anticipate a positive result but we haven't tested on it.

Yuanhua