cbx
cbx
I have the same problem. Thank you very much for the solve. But one more question, where should I inserted the custom code? Rewrite the F.interpolate function in pytorch? or...
Thank you for your prompt reply. I used the default index=0, I tried index=1, but the situation is same. I run step and found that the reconstruction failed at line...
I further check downstream, it failed at "Chem.SanitizeMol(rd_mol,Chem.SANITIZE_ALL^Chem.SANITIZE_KEKULIZE)"
I encounter the same problem. Hope the author would help to clarify this
basically I followed the Posebuster way like below: true_file is the GT pose, cond_file is the protein, test_file is the prediction from UniMol [5SAK_predict.zip](https://github.com/user-attachments/files/16781255/5SAK_predict.zip) I attached one of the strange...
Thank you for your prompt reply. I ran the posebuster_demo notebook, and the final result is: results length: 428 RMSD < 0.5 : 0.08878504672897196 RMSD < 1.0 : 0.4696261682242991 RMSD...
Thanks for the fix. I added back the -steric-clash-fix command to the inference call, and the results after running the notebook change a little bit, it looks a bit lower...
I want to follow-up on this dice metric issue. The code provided calculates dice=1 when no foreground pixel in both gt and in prediction. However, in nnUNet, this is calculated...
Yes, all slice will have at least one foreground class. However, take for example a 3-class segmentation, on a particular slice/image, only class 0 and class 1 present (it is...
Same thing happen to me, waiting for a solution