shujieH

KeyError: 'K16716' when using DRAM-v.py annotate

3

Hi Michael Thank you for providing a very powerful tool. I got some errors when using DRAM-v.py annotations. **The command was : DRAM-v.py annotate -i BH0-vs2-pass2/for-dramv/final-viral-combined-for-dramv.fa -v BH0-vs2-pass2/for-dramv/viral-affi-contigs-for-dramv.tab -o BH0-dramv-annotate...

Questions about threshold selection

1

Hi， jessieren! We are using VirHostMatcher to analyze viruses and hosts in metagenomic data, but we do not know how to select the optimal threshold to analyze d2star_k6.csv, could you...

Feasibility of COBRA for Metatranscriptomic Data

3

Hi Xinglin, Thank you for your outstanding paper and tool! I'm looking to identify RNA viruses in the metatranscriptome. After using Megahit for assembly, I'm curious if COBRA could be...