shivanshss

icon location Bangalore, India icon location I am a research scholar. I am interested in high-throughput genomics. Here is a collection of scripts and tools I have used/made

Results 2 comments of shivanshss

Scaffold longer than reference genome due to NNNNs

Dear Vincent, I have also seen this behaviour while working with the Tribolium castaneum genome. If I scaffold my draft genome using the published reference, I see two giant contigs...

Scaffold longer than reference genome due to NNNNs

Dear @vappiah Dot plot between your query and reference before using Ragtag would tell you if there is a gap in your query that could have been filled with Ns...