Shengpu Tang
Shengpu Tang
Hello, I have just updated the code to fix this error. Please download the latest code from GitHub. You may check out an example with data containing time-dependent ICD codes...
> 1. I have noticed in your `icd_time_test` example, your icd code is a series of letters and numbers e.g. `V502` but your `hierarchical_sep: ':'`. My diagnosis code contains one...
Hi, The parser for ICD9/ICD10 relies on third-party packages that I do not have control of, so it is possible the dictionary they use is outdated and may be missing...
> Also, what would `ICD9_CODE_value_(1.999, 314.0]` possibly represent? This is likely because some ICD codes looks like numbers and python would interpret them as numbers unless we explicitly tell it...
Hi, I believe this is a column naming issue. Can you check the `df_population` file (mortality_48.h.csv) if it uses `ID` or `ICUSTAY_ID` as the identifier column?
Hi, I apologize for not checking carefully. From the line where the error is raised, `df = df[df['ID'].isin(df_population.index)]` You should check if `df` has a column named `ID`. This should...
Hi Nephalen, I am experiencing the same issue as you do using the provided MATLAB code. For example, ICU stay IDs 200035 and 299994 do not have any antibiotic prescriptions...
Hello, the `numeric_mask` is generated from the `is_numeric` function in `helpers.py`: https://github.com/MLD3/FIDDLE/blob/master/FIDDLE/helpers.py#L191 on this line: https://github.com/MLD3/FIDDLE/blob/master/FIDDLE/steps.py#L601 I agree with your logic, so it is indeed surprising if `input_data.p` does not...