Huanjie Sheng

icon indicating a website link shenghuanjie.github.io

icon company Roche Sequencing Solutions, Inc. icon location Santa Clara, CA, USA icon location Senior Data Scientist, Bioinformatics

Results 2 comments of Huanjie Sheng

Can't open gcsfuse-mounted HDF5 file with h5py

Having the same issue here. Is there a solution for this? I'm using some existing pipelines with h5py. ``` h5py/_objects.pyx in h5py._objects.with_phil.wrapper() h5py/_objects.pyx in h5py._objects.with_phil.wrapper() h5py/h5d.pyx in h5py.h5d.DatasetID.read() h5py/_proxy.pyx in...

Can't open gcsfuse-mounted HDF5 file with h5py

> With a newer version of h5py, you shouldn't need to use FUSE at all, just open the file directly > > ``` > of = gcs.open('filename', 'rb') > h...