sharbie88

Did you get an answer here? or know the solution?

I found a comment that includes --labels: python roary_plots.py --labels ...

I also had a similar error as above: > ### snpEff build -c reference/snpeff.config -dataDir . -gff3 ref WARNING: All frames are zero! This seems rather odd, please check that...

See also #433

I am also trying to use snippy within Nullarbor and got: > Need samtools --version >= 1.7 but you have 1.10 - please upgrade it. > My conda was 4.8.3...

This batch is just a subset of 401 isolates I’ve put through earlier. So they should be ok. I've attached the preview.nwk file (in .txt form) - looks ok to...