shanshenbing

Hello, I get the same error when loading my 10x genomics results. I installed your dev version package and restart my Rstudio and get same error. immdata

Hello, I am using the latest stable monocle 3 and I also can not find ncol parameter in plot_cells() function. I wonder to know how to arrange my plot without...

Hello, I use GSEA function from clusterprofiler following the tutorial: http://yulab-smu.top/biomedical-knowledge-mining-book/universal-api.html. The tutorial works well. When I run my data, I got warnings same as https://github.com/YuLab-SMU/clusterProfiler/issues/214. The issue tells me...

I do want to know why this [jupyter notebook](https://nbviewer.org/github/theislab/paga/blob/master/planaria/planaria.ipynb) can use 'neoblast 1' as root, a string you know, but cause error now.

I got a error when using netAnalysis_signalingChanges_scatter function. After checking my cellchat obj, I found cellchat@netP$centr is null. Actually, my cellchat is a merged cellchat list from chbm and chlm....

Thank you for your advice.

Thank you for the quick answer. My dplyr version is 1.0.8. I'll try a newer version of dplyr and check the result.

**I updated my dplyr to 1.0.10 and run tutorial as this:** library(SCEVAN) library(dplyr) load('./MGH106_data.RData') #myobj

Thank you for your hard work. I get it!

Finally, I found the reason. I used monocle3(version 1.2.9) when generating CDS obj. But I used monocle3 (version 1.0.0) to load CDS. Different monocle3 version caused the error.