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bug fixs for Issue 39&54; SHA2 certificate support

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hi timkurvers, I have do some bug fixs and also add SHA2 certificate support. Please review my code.

"Prediction failed" when createdb --gpu 1

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I want to create a db based on Prostt5, and first use SwissProt to test it, and I encounter the error "Prediction failed". The execution command is as follows: ./foldseek...