sentausa

Bandage can't find BLAST although it's installed

6

I have NCBI BLAST installed locally on my Linux computer, but Bandage can't find it. `$ which makeblastdb` `/home/es249628/bin/ncbi-blast-2.4.0+/bin/makeblastdb` `$ which blastn` `/home/es249628/bin/ncbi-blast-2.4.0+/bin/blastn` Everytime I click 'Build BLAST database' button...

plot_ordination color and shape variables were not found

15

Dear Joey, I am trying to make some ordination plots on my data, but I always encounter errors when I use `type = "samples"` using plot_ordination. `> mydata` `phyloseq-class experiment-level...