Gene Selkov

protected (some) complex variants from left-trimming in normalize

1

This patch prevents the trimming of complex variants that are already normalized. Example: trimming `CAT -> CG` changes it to a form that is hard to analyze: AT -> G....

Erroneous left-trimming of complex alleles

3

The test for left-trimming in **normalize.cpp** is too simple. It only checks a single prefix base for equality. That results in variants like `CAT -> CG` (that's `CA -> C`...

This tool may be useful in troubleshooting sequencing runs.

ac.error() sends an empty response to binder

1

I have a mojit with a binder that tunnels a database query to its server-side controller. In the binder, the response is processed by a ModelList hooked to a DataTable....