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Generating seismic data and associated labels to train deep learning networks.

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When trying to build a model with ` include_channels = True`, the code gives the following error: ![image](https://github.com/sede-open/synthoseis/assets/76233446/c5421473-013d-4f91-8c1f-d29beaf43c30) When analyzing, I came upon the following commented lines on line `115`...

When I attempted to use RoseTTAFold, I encountered the following error at the end. ``` ValueError Traceback (most recent call last) [](https://localhost:8080/#) in () ----> 1 mn.build_model(user_json='/content/drive/MyDrive/synthoseis-master/config/example.json', run_id=1,test_mode=50) 5 frames...

It would be great if we could use zarr and xarray to handle data instead of plain npy files.

enhancement

[144 Rockrproperty models](https://github.com/sede-open/synthoseis/blob/6352bc62b2de3542f8dfa9b94a2b1f0f875fda49/rockphysics/RockPropertyModels.py#L145) When a user names a project say: `example1` and the software attempts to load a rock property model it fails if an rpm file does not exist...

bug

The call in main.py to write_closure_info_to_log() is hardwired to pass on the second, third, and fourth angle. That looks like a remnant from the past where the code assumed the...

I found that the dimensions of the X and Y axis set using cube_shape in the configuration JSON file are assumed to be the same in the code: the relative...

The parameters for the onlap layers are hardwired in Horizons.py on line 349: onlap_layer_list = np.sort( np.random.uniform( low=5, high=200, size=int(np.random.triangular(1, 4, 7) + 0.5) ).astype("int") ) This means that there...

When running the synthoseis-quick-start notebook with the supplied example.json config file, get_middle_z regularly generates an error that random_idx cannot be calculated because xyz_xyz.shape[1] equals 0. The shape of xyz_xyz is...

Hi, thanks for you work. Wondering how to create some closure images shown like in /img/closure1, closure2, etc.. I was trying to run example notebook but got this: `Number of...

I'm trying to create velocity model of small size; I keep getting Memory error, even after reducing the model size significantly. Any suggestion about how to resolve this would be...