wdlRunR
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seandavi
Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
Hello, this looks amazingly useful and I would like to start working with this package. I would like to have this on CRAN as it provides extra level of rigor...
The more I work with our cromwell and this package, the more I'm wishing it would give me tidyr-inspired results like cromwellQuery() does for the basics. Having cromwellOutputs() give me...
FYI, currently cromwellStats() returns this magic: ``` > cromwellStats() Error: ``` Package wdlRunR version 0.5.2 in R version 3.5.2 (2018-12-20) Looks like locally when I use the Swagger API interface,...
When specified as named vector, errors out. However, list works. Need to check value of terms. ```r y = cromwellQuery(terms=c(status='Succeeded')) Hide Traceback Rerun with Debug Error: 4. stop(sprintf("Cromwell API request...
Should be able to: - [ ] search for available releases - [ ] download a released version of the `.jar` file - [ ] return download path for easy...
Cromwell can run in single-workflow local mode using `java -jar ... run` rather than `server`. Provide support for this operation.