Stephen Watts
Stephen Watts
Closing due to inactivity, please re-open if you'd like to continue discussing
Hi @rhassine, I've reworked the nf-test GitHub Action workflow over in https://github.com/nf-core/oncoanalyser/pull/265, which also has the test profile fully working. I left the reference data caching untouched so you can...
Force pushing clean history containing fixes for linter
Force pushing again with additional changes, cleaned commits
@rayanhassaine adding an alternative reviewer as discussed
Force pushing with commits rebased on top of latest dev
Hi @peteryzheng, thanks for writing up this as an issue - addressing redundancy in the analysis of multiple tumours from the same patient has been planned for some time. I'm...
The 3.0.0 release will be a few months away, and will likely begin to come together towards / around the new year. Thank you for the feedback, we share the...
This remains dependent on the following PR and now falls out of scope of the upcoming release: - https://github.com/hartwigmedical/hmftools/pull/691
Test failures are to be addressed in https://github.com/nf-core/oncoanalyser/pull/265