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using squidpy native datasets

Open amorje opened this issue 1 year ago • 1 comments

Description

was unable to load datasets which are included in squidpy (visium_hne_adata())

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Minimal reproducible example

import squidpy as sq

adata = sq.datasets.visium_hne_adata() img = sq.datasets.visium_hne_image()

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Traceback

adata = sq.datasets.visium_hne_adata() AttributeError: module 'squidpy' has no attribute 'datasets'

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Version

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amorje avatar Jul 10 '23 14:07 amorje

Hi @amorje thank you for your interest in Squidpy.

I couldn't reproduce your error with the latest version 1.3.0 of Squidpy. Which Squidpy version are you running?

LLehner avatar Jul 19 '23 11:07 LLehner