spatialdata-plot
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Add a gene_symbols parameter to `render_shapes` and `render_points`
It would be great to have a gene_symbols
argument to render_shapes and render_points, similar to what scanpy has in all (most?) plotting functions.
The goal is being able to use ensembl identifiers are var_names
, while retaining the possibility to conveniently make plots by gene symbols, which are stored in another column in adata.var
.
Possible alternatives:
Instead of passing this to the function call, there could be a per-spatialdata configuration option which columns in .var
to lookup when a color
is specified.