scvi-tools
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feat(train) Add support for categorial covariates in scArches
closes https://github.com/scverse/scvi-tools/issues/2583
Codecov Report
All modified and coverable lines are covered by tests :white_check_mark:
Project coverage is 85.31%. Comparing base (
b9d839d) to head (e1830a3). Report is 53 commits behind head on main.
Additional details and impacted files
@@ Coverage Diff @@
## main #2936 +/- ##
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Coverage 85.31% 85.31%
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Files 167 167
Lines 14388 14386 -2
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- Hits 12275 12274 -1
+ Misses 2113 2112 -1
| Files with missing lines | Coverage Δ | |
|---|---|---|
| src/scvi/model/base/_archesmixin.py | 92.07% <100.00%> (-0.10%) |
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Can you please run https://docs.scvi-tools.org/en/1.0.2/tutorials/notebooks/scarches_scvi_tools.html with adding categorical covariate key in addition to the batch key and by replacing batch_key with categorical covariate key and verify that the results are the same?
Results were the same