scvi-tools
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Likelihood params bugfix
Bug:
When using gene_likelihood!="zinb"
, the function get_likelihood_parameters()
would fail.
To reproduce:
model = SCVI(adata, gene_likelihood="nb")
model.get_likelihood_parameters()
Fix:
Added if self.module.gene_likelihood == "zinb":
to a few lines.
Codecov Report
Base: 91.39% // Head: 91.40% // Increases project coverage by +0.01%
:tada:
Coverage data is based on head (
93d7009
) compared to base (f017b50
). Patch coverage: 100.00% of modified lines in pull request are covered.
Additional details and impacted files
@@ Coverage Diff @@
## master #1618 +/- ##
==========================================
+ Coverage 91.39% 91.40% +0.01%
==========================================
Files 116 116
Lines 9190 9193 +3
==========================================
+ Hits 8399 8403 +4
+ Misses 791 790 -1
Impacted Files | Coverage Δ | |
---|---|---|
scvi/model/base/_rnamixin.py | 93.36% <100.00%> (+0.62%) |
:arrow_up: |
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