scanpy
scanpy copied to clipboard
Regress out
This contribution also holds a faster implementation for regress_out function in the form of a new function 'numpy_regress_out'. The numpy_regress_out modification provides an overall speedup of approx ~18x in comparison to the already existing 'regress_out' function
Codecov Report
Merging #2456 (3be56a6) into master (d08518f) will decrease coverage by
0.16%. The diff coverage is15.62%.
Additional details and impacted files
@@ Coverage Diff @@
## master #2456 +/- ##
==========================================
- Coverage 72.12% 71.97% -0.16%
==========================================
Files 104 104
Lines 11688 11720 +32
==========================================
+ Hits 8430 8435 +5
- Misses 3258 3285 +27
| Files Changed | Coverage Δ | |
|---|---|---|
| scanpy/preprocessing/_simple.py | 75.34% <15.62%> (-4.76%) |
:arrow_down: |