Nearest neighbours

Open Sakshi-2797 opened this issue 2 years ago • 1 comments

We have replaced the existing nearest neighbor implementation from umap with scikit-learn's implementation. By using Intel extension for scikit-learn, this implementation can be upto 2x faster for large datasets.

Feb 21 '23 11:02 Sakshi-2797

Codecov Report

Merging #2426 (69ffda2) into master (9969734) will decrease coverage by 0.18%. The diff coverage is 22.85%.

Additional details and impacted files

@@            Coverage Diff             @@
##           master    #2426      +/-   ##
==========================================
- Coverage   71.87%   71.70%   -0.18%     
==========================================
  Files          98       98              
  Lines       11496    11515      +19     
==========================================
- Hits         8263     8257       -6     
- Misses       3233     3258      +25

Impacted Files	Coverage Δ
scanpy/neighbors/__init__.py	`71.06% <22.85%> (-4.33%)`	:arrow_down:

Mar 23 '23 09:03 codecov[bot]