scanpy
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Fix legacy 10x loader when more than one genome exists
Fixes #2246
A very small change with a small test. The new test fails for the current master branch, but passes with the fix.
Codecov Report
Merging #2248 (7193fd0) into master (bd06cc3) will not change coverage. The diff coverage is
100.00%
.
@@ Coverage Diff @@
## master #2248 +/- ##
=======================================
Coverage 71.82% 71.82%
=======================================
Files 98 98
Lines 11539 11539
=======================================
Hits 8288 8288
Misses 3251 3251
Impacted Files | Coverage Δ | |
---|---|---|
scanpy/readwrite.py | 67.66% <100.00%> (ø) |
@ivirshup @flying-sheep I wonder if this seems like the right fix to you?
Cool ! in order to load legacy h5, I had to freeze scanpy==1.8.2 now I included this fix in a scanpy fork
I hope it gets merged soon
@meeseeksdev backport to 1.9.x