`sc.pl.stacked_violin`, Is it also possible to add tiny y-axis scale bars to the stacked_violin(`swap_axes = True`)?

[danli349]

Hello,

Is it also possible to add tiny y-axis scale bars to the stacked_violin(swap_axes = True), to indicate the expression levels?

Thanks Dan

[ivirshup]

Similar to the totals count for the groups right?

I believe this isn't currently possible, but could be a nice addition.

[abearab]

Yeah, it's not working

Here https://scanpy.readthedocs.io/en/stable/generated/scanpy.pl.violin.html they say

Wraps seaborn.violinplot() for AnnData.

but when you add orient='h' or orient='v' to the sc.pl.violin run, it fails wit this error:

TypeError: seaborn.categorical.violinplot() got multiple values for keyword argument 'orient'

[flying-sheep]

How would one get the scale bars? How is orient related?