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Reindexing only valid with uniquely valued Index objects
Describe the bug mudata v.0.2.3 version, anndata v0.9.2, calling mudata.update(), causing anadata data update failure, confirming that there are no duplicate data in the original data, generating duplicate data in line 799 now_index = pd.Index(now_values), triggering line 801 index_order = prev_index.get_indexer(now_index), pandas.errors.InvalidIndexError: Reindexing only valid with uniquely valued Index objects
To Reproduce Steps to reproduce the behaviour.
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Expected behaviour A clear and concise description of what you expected to happen.
System
- OS: centOS
- Python version ：3.8.12
- Versions of libraries involved ：Anndata: v0.9.2 mudata: v0.2.3 pandas: v1.5.3
Additional context Add any other context about the problem here.
We improved a few things about .update() since v0.2.3.
Closing it due to inactivity, please reopen if there's still an issue!