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Fixes for MuData 0.3 release

Open gtca opened this issue 2 years ago • 1 comments

  • [x] Fix nested MuData dimensions in __repr__()
  • [x] Fix .uns contents for views (#52)
  • [x] Use mod-order attribute in read_zarr() (#48)
  • [x] Avoid sorting .var_names in the global index when modalities are added and .var_names are intersecting (#46)
  • [x] Coerce nullable boolean arrays to bool when there are no null values (https://github.com/scverse/muon/issues/111)

gtca avatar Sep 10 '23 01:09 gtca

Codecov Report

Merging #53 (7fe6259) into mudata-0.3 (29b5a11) will increase coverage by 1.06%. Report is 5 commits behind head on mudata-0.3. The diff coverage is 76.33%.

Additional details and impacted files
@@              Coverage Diff               @@
##           mudata-0.3      #53      +/-   ##
==============================================
+ Coverage       69.12%   70.19%   +1.06%     
==============================================
  Files              14       17       +3     
  Lines            1671     1892     +221     
==============================================
+ Hits             1155     1328     +173     
- Misses            516      564      +48     
Files Changed Coverage Δ
mudata/_core/io.py 64.43% <39.18%> (-5.63%) :arrow_down:
mudata/_core/utils.py 79.06% <60.00%> (-6.65%) :arrow_down:
mudata/_core/mudata.py 63.86% <80.00%> (+1.19%) :arrow_up:
tests/test_mod_order.py 100.00% <100.00%> (ø)
tests/test_nullable.py 100.00% <100.00%> (ø)
tests/test_repr.py 100.00% <100.00%> (ø)
tests/test_view_copy.py 100.00% <100.00%> (ø)

codecov-commenter avatar Sep 10 '23 01:09 codecov-commenter