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Feature Request: Increase flexibility of `to_Seurat`

Open JohnMMa opened this issue 6 months ago • 0 comments

I realized one thing: currently, to_Seurat will always write the expression to the assay of 'RNA'. I wonder if devs may add an option so that we can customize the assay the expression to be written to? We often do pure CITE-seq experiments, which means output from that usage should be in the assay of 'ADT'--which means an entire new Seurat object needs to be created to carry on the assay data because the assays' names of Seurat objects cannot be directly modified.

JohnMMa avatar Jan 25 '24 23:01 JohnMMa