Stanley Lan

The dockerized command and outputs, along with dstat lines (set one entry per 10 minutes during the run) on a 36 threaded computer. With "--vep-forks 45", the observation is ~23...

For some tools (e.g. Sentieon bam_to_vcf), one unique SM tag is needed in the input bam mapping. However the merged bam file can have multiple @RG lines that contains several...

This is a suggestion. We have a docker platform that users can use the following input to run tools via docker image: input data files: (e.g,: *.bam, ref.fa, taget_region.bed) cmd:...

SF15975 Andrew from St. Jude can't download the symlinked data for running their wdl workflow on platform, and the streaming option degraded the performance quite a bit (samtools index does...