Salvador Capella

icon company Barcelona Supercomputing Center (BSC) | Spanish National Bioinformatics Institute (INB) | ELIXIR Tools platform icon location Barcelona, Spain

Results 16 issues of Salvador Capella

Provide an updated windows version

Provide an updated Windows-compatible version incorporating the latest trimAl features and fixed bugs. Ideally we should have a (automated) mechanism for providing this specific compilation

Implement Stockholm format support

Implement ATX alignments support

I'm not sure whether is worthy to implement this very specific format in trimAl (or any associated program) http://genome.ucsc.edu/goldenPath/help/axt.html

Removing sequences with a % gaps equal or greater than a threshold

S

Improving warning when working with backtranslation

> > > WARNING: Cutting sequence "Phy006C668_LYNLY" at first appearance of stop codon "TAA" (residue "") at position 1045 (length: 1047)

Remove "{" and "}" symbols

Just to simplify trimAl command line, these symbols '{' and '}' should be removed