Sébastien Besson

Use templates for generating a space

3

In order to prevent unwanted commits as in https://github.com/openmicroscopy/devspace/pull/3#issuecomment-156027682, we could consider using more configuration templating as in https://github.com/openmicroscopy/openmicroscopy/pull/4093 generate new files rather than modifying them in-situ.

Upcoming aiohttp 4 breakages

3

See https://github.com/ome/ome-zarr-py/pull/127 for the original discussion. The CI pre-releases workflow running on `ome-zarr-py`, a downstream consumer of `fsspec` identified an incompatibility between `fsspec` and the next major version of `aiohttp`...

Accessing bucket with public access to specific prefixes

1

I am encountered an issue while trying to mount a bucket where public access has only been configured via policy for certain prefixes. More specifically, I am interested in https://github.com/broadinstitute/cellpainting-gallery....

Remove Pixels name, repo and path columns

3

# Background The OMERO 4.2.0 release in July 2010 included an alteration to the database schema to add `name`, `path` and `repo` columns to the `Pixels` table with a similar...

Removal of python-future compatibility

8

See also https://github.com/ome/omero-py/pull/390 This PR reviews and cleans up all the code ensuring Python 2/3 compatibility including: - all imports of `future` and `past` modules - all checks of `sys.version`...

Upgrade Ivy to 2.5.1

1

Although functional, the version of Ivy used by our build system is pretty ancient (2.4.0, December 2014). Two releases have been made since, the last ones including CVE fixes and...

testSaneUsedFiles: check getCurrentFile is the first file in the getUsedFiles list

2

Discussed earlier with @melissalinkert and @jburel, opening initially to assess how many formats deviate from this assumption in the nightly CI builds

``` TASK [ome.prometheus : prometheus | docker alertmanager] ******************************************************************************************** [DEPRECATION WARNING]: Please note that docker_container handles networks slightly different than docker CLI. If you specify networks, the default network will...

As a preamble, I wanted to highlight the Zarr v3 specification provides a list of officially supported codecs each with their own specification e.g. [blosc](https://zarr-specs.readthedocs.io/en/latest/v3/codecs/blosc/v1.0.html). Even though https://zarr-specs.readthedocs.io/en/latest/v3/codecs.html is still...

https://github.com/ome/omero-ms-zarr/blob/v0.1.6/spec.md#image includes two conventions for the value of the `array` key: either a relative path or an URL. While the first convention was implementated and tested by `omero-cli-zarr`, it is...